Anna Kruczyńska, Agnieszka Kuźniar, Jacek Podlewski, Andrzej Słomczewski, Jarosław Grządziel, Anna Marzec-Grządziel, Anna Gałązka, Agnieszka Wolińska,
... of our study was to gain insight into Bacteroidota structure, including the phylum, family, and genus in ... expand the information on chemical factors directly affecting Bacteroidota abundance in the soil environment. Bacteroidota were shown to be present with varying abundance ... practice and the season. The highest abundance of Bacteroidota occurred when crop rotation was the main agricultural ... compared. The reduction in the relative abundance of Bacteroidota, in particular Flavobacterium sp. in fields K20 (intercropping) ...
Tópico(s): Microbial Community Ecology and Physiology
2022 - Elsevier BV | Agriculture Ecosystems & Environment
Jun-Jie Huang, Kailin Gao, Yang Lü, Yahai Lu,
... initial stage was derived mainly from Firmicutes while Bacteroidota contributed mostly to the later stage increase of ... genes were prevalent in Firmicutes but scarce in Bacteroidota . Wood–Ljungdahl pathway (WLP) was present in Firmicutes but not detected in Bacteroidota . Overall, Bacteroidota contained the largest proportion of total GHs and ... paddy soil metagenomes. The strong capacity of the Bacteroidota phylum to degrade straw polymers was specifically attributed ... in the initial breakdown of straw polymers, while Bacteroidota became abundant and possibly responsible for the decomposition ...
Tópico(s): Microbial Community Ecology and Physiology
2023 - BioMed Central | Environmental Microbiome
Kuo-Jian Ma, Yong-Lian Ye, Yun-Han Fu, Ge‐Yi Fu, Cong Sun, Xue‐Wei Xu,
... have resulted in great microbial diversity, in which Bacteroidota strains are considered as one of the primary ... investigated the profile of culturable bacteria, selected three Bacteroidota for polyphasic taxonomic analysis and revealed their polysaccharide ... pure cultured bacteria and they mainly distributed in Bacteroidota , Pseudomonadota , Bacillota , and Actinomycetota . It is shown that ... species, mainly distributed in Flavobacteriales and Cytophagales within Bacteroidota . Three Bacteroidota strains, M17 T , M82 T , and ...
Tópico(s): Methane Hydrates and Related Phenomena
2023 - Frontiers Media | Frontiers in Marine Science
Jennifer Hudson, Suhelen Egan,
Abstract Bacteria within the phylum Bacteroidota (Bacteroidetes) are known to cause devastating and widespread disease outbreaks in marine eukaryotic hosts. However, with few pathogens described in detail, ... the literature to evaluate the current understanding of Bacteroidota that cause disease in marine hosts. Isolates affiliated ... associated with disease. We found that pathogenic marine Bacteroidota largely conformed to an opportunistic lifestyle but could ... degrading enzymes. Overall, the nature of disease involving Bacteroidota pathogens appears to be an outcome of complex ...
Tópico(s): Infections and bacterial resistance
2022 - Wiley | Environmental Microbiology
Thibault R. Bongiovanni, Casey J. Latario, Youn Le Cras, Evan Trus, Sophie Robitaille, Kerry Swartz, Danica T. Schmidtke, Maxence S. Vincent, Artémis Kosta, Jan Orth, Florian Stengel, Riccardo Pellarin, Eduardo P. C. Rocha, Benjamin D. Ross, Éric Durand,
... sized membrane complex (MC). However, the genomes of Bacteroidota with T6SSs appear to lack genes encoding homologs ... are essential for T6SS function and encode a Bacteroidota-specific MC. We purify this complex, reveal its ... components. Protein TssN mediates the connection between the Bacteroidota MC and the conserved baseplate. Although MC gene content and organization varies across the phylum Bacteroidota, no MC homologs are detected outside of T6SS ...
Tópico(s): Escherichia coli research studies
2024 - Nature Portfolio | Nature Communications
Xiaodan Shi, Wei Xu, Xinghua Che, Jiawen Cui, Xinchi Shang, Xiaohua Teng, Zhiying Jia,
... 05) increase in harmful bacteria (such as Fusobacteriota, Bacteroidota (LPS-producing bacteria), Verrucomicrobiota, Bacteroides, Aeromonas, and Stenotrophomonas) ... LPS level in serum and the abundance of Bacteroidota (LPS-producing bacteria) in the intestine. Bacteroidota exhibits the six highest relative abundance at the phylum level, which indicates that LPS produced by Bacteroidota can increase the LPS level in serum. Additionally, ...
Tópico(s): Aquaculture disease management and microbiota
2023 - Frontiers Media | Frontiers in Microbiology
Zhige Tian, Hongli Pu, Dongdong Cai, Guangmei Luo, Lili Zhao, Ke Li, Jie Zou, Xiang Zhao, Min Yu, Yayong Wu, Tiankuo Yang, Peng Guo, Xiao Hu,
... using 16S rRNA gene sequencing. Results showed that Bacteroidota (36.5%) and Firmicutes (32.8%) were the main phyla in the gut, while Proteobacteria , Bacteroidota , Firmicutes , and Actinobacteriota were the dominant phyla in ... sequencing analysis of fecal samples showed that: (1) Bacteroidota was the most abundant in Japalura sensu lato , ... from the bacterial community of insectivorous animals; (2) Bacteroidota , Firmicutes , Actinobacteriota , Fusobacteriota , and Cyanobacteria were the most ...
Tópico(s): Reproductive tract infections research
2022 - BioMed Central | BMC Veterinary Research
Bikiran Pardesi, Anthony M. Roberton, Kevin C. Lee, Esther R. Angert, Douglas Rosendale, Svetlana Boycheva, William Lindsey White, Kendall D. Clements,
... from 20 phyla and 123 genera were obtained. Bacteroidota, Firmicutes and Proteobacteria were the major phyla in ... the most dominant group in section III, whereas Bacteroidota (69.3%) dominated section V. Total short-chain ... these two most distal sections. The abundance of Bacteroidota correlated with propionate concentration in section V, while ... IV and V, which correlated with abundance of Bacteroidota. Despite differences in gut microbial community composition, SCFA ...
Tópico(s): Aquaculture disease management and microbiota
2022 - Wiley | Molecular Ecology
Dai Ishikawa, Xiaochen Zhang, Kei Nomura, Tomoyoshi Shibuya, Mariko Hojo, Makoto Yamashita, Satoshi Koizumi, Fuhito Yamazaki, Susumu Iwamoto, Masato Saito, Keisuke Kunigo, Ryosuke Nakano, Nakayuki Honma, Itaru Urakawa, Akihito Nagahara,
The proportion of certain Bacteroidota species decreased in patients with ulcerative colitis, and the recovery of Bacteroidota is associated with the efficacy of fecal microbiota transplantation therapy. We hypothesized that certain Bacteroidota may advance ulcerative colitis treatment. Accordingly, we aimed to evaluate the anti-inflammatory effects of Bacteroidota strains isolated from donors.
Tópico(s): Gut microbiota and health
2024 - Oxford University Press | Inflammatory Bowel Diseases
Qi Li, Jingjing Chang, Linfeng Li, Xiaoyang Lin, Yichun Li,
... OC complexity and the abundances of Firmicutes and Bacteroidota, contributing to the decreased rice Cd uptake. The ... and structures, by increasing the relative abundances of Bacteroidota and Firmicutes and decreasing those of Acidobacteria, Actinobacteria, ... analysis revealed that the increase of Firmicutes and Bacteroidota associated with Cd adsorption and sequestration contributed to ...
Tópico(s): Soil Carbon and Nitrogen Dynamics
2024 - Elsevier BV | The Science of The Total Environment
Hyojun Seo, Ju Hui Kim, Sang-Moo Lee, Seon‐Woo Lee,
Flavobacterium is a genus within the phylum Bacteroidota that remains relatively unexplored. Recent analyses of plant microbiota have identified the phylum Bacteroidota as a major bacterial group in the plant rhizosphere. While Flavobacterium species within the phylum Bacteroidota have been recognized as pathogens in the aquatic ...
Tópico(s): Plant Pathogenic Bacteria Studies
2024 - Hanrimwon Publishing Company | The Plant Pathology Journal
Caroline Wasén, Leah C. Beauchamp, Julia Vincentini, Shuqi Li, Danielle S. LeServe, Christian Gauthier, Juliana Romano Lopes, Thaís G. Moreira, Millicent N. Ekwudo, Zhuoran Yin, Patrick da Silva, Rajesh K. Krishnan, Oleg Butovsky, Laura M. Cox, Howard L. Weiner,
... Aβ1-42 injected into the hippocampus. Depleting murine Bacteroidota with metronidazole decreases amyloid load in aged 5xFAD ... together, our study demonstrates that members of the Bacteroidota phylum contribute to AD pathogenesis by suppressing microglia ...
Tópico(s): Gut microbiota and health
2024 - Nature Portfolio | Nature Communications
Jae Hyun Shin, Glenn Tillotson, Tiffany N. MacKenzie, Cirle A. Warren, Hannah M. Wexler, Ellie J. C. Goldstein,
... part due to its plasticity and fluid genome. Bacteroidota (formerly, Bacteroidetes) have a very broad metabolic potential ... their carbohydrate metabolism to the available nutrients. Gastrointestinal Bacteroidota species produce short-chain fatty acids such as ... ranging and many beneficial influences on the host. Bacteroidota, via bile acid metabolism, also play a role ...
Tópico(s): Probiotics and Fermented Foods
2024 - Elsevier BV | Anaerobe
Yang Liu, Mukan Ji, Wenqiang Wang, Tingting Xing, Yan Qi, Belinda C. Ferrari, Yongqin Liu,
... were dominated by Gammaproteobacteria, Cyanobacteria, Alphaproteobacteria, Actinobacteriota, Acidobacteriota, Bacteroidota, Chloroflexi, Gemmatimonadota, Firmicutes, and Verrucomicrobiota (Figure S4A). The ... was more abundant in barren soils, while Actinobacteriota, Bacteroidota, Firmicutes, Chloroflexi, and Gemmatimonadota were more abundant in ... Among them, the relative abundances of Actinobacteriota and Bacteroidota were significantly higher in vegetated soils than those ...
Tópico(s): Indigenous Studies and Ecology
2023 - Wiley | iMeta
Tingting Zhang, Martín Grube, Xinli Wei,
... while Proteobacteria (68.9%), Cyanobacteria (2.57%), and Bacteroidota (4.95%) were higher in L (Figure 1C, ... the relative abundance of copiotrophic taxa, such as Bacteroidota and Proteobacteria were higher in lichen samples (L ... microbiota fraction represented by Proteobacteria (Figure 1C). Besides, Bacteroidota were also enriched in L, which are relatively ...
Tópico(s): Mycorrhizal Fungi and Plant Interactions
2023 - Wiley | iMeta
Hong Liu, Mukesh Kumar Awasthi, Zengqiang Zhang, Asad Syed, Ali H. Bahkali, Raveendran Sindhu, Meenakshi Verma,
... in the thermophilic stages, while Proteobacteria, Actinobacteriota, and Bacteroidota were the dominant flora in the maturation stages. The abundance of Bacteroidota and Actinobacteriota were increased by 17.49%∼32. ... Additionally, redundancy analysis showed that Proteobacteria, Actinobacteriota, and Bacteroidota were positively correlated with NO3−-N, TKN, and ...
Tópico(s): Constructed Wetlands for Wastewater Treatment
2023 - Elsevier BV | Bioresource Technology
Kaitlyn Oliphant, Mehneez Ali, Mark D’Souza, Patrick D. Hughes, Dinanath Sulakhe, Annie Z. Wang, Bingqing Xie, Rummanu Yeasin, Michael E. Msall, Bree Andrews, Erika C. Claud,
... had a depletion in the abundance/prevalence of Bacteroidota and Lachnospiraceae, independent of morbidity and caloric restriction. ... habitat filtering (i.e., antibiotics and enteral feeding). Bacteroidota and Lachnospiraceae are known core taxa of the ...
Tópico(s): Urinary Tract Infections Management
2021 - Landes Bioscience | Gut Microbes
... with several bacterial taxa including Chloroflexi, WPS-2, Bacteroidota, Myxococcota, Bacteroidota, and Patescibacteria. These bacteria permitted the tea plants ... these nutrients were positively correlated with Myxococcota, Latescibacterota, Bacteroidota, Deinococcota, Bdellovibrionota, SAR324 Clade (Marine Group B), and ...
Tópico(s): Soil Carbon and Nitrogen Dynamics
2021 - Springer Science+Business Media | Journal of soil science and plant nutrition
Wenlu Li, Zhichao Wang, Weiping Li, Zhe Li,
... community. The dominant bacterial phyla were Chloroflexi, Proteobacteria, Bacteroidota, Firmicutes, and Actinobacteriota, and the relative abundances of Proteobacteria, and Bacteroidota significantly increased in the microplastic treatments during the ... 01), and important drivers affecting the dissimilarity of Bacteroidota abundance were the changes of TN content and ...
Tópico(s): biodegradable polymer synthesis and properties
2022 - Elsevier BV | Chemosphere
Shirin Sultana, Md. Nasir Khan, Md. Shahdat Hossain, Jingcheng Dai, Mohammad Shamsur Rahman, M. Salimullah,
... The OTUs consisted of four major phyla, Proteobacteria, Bacteroidota, Actinobacteriota and Firmicutes. Among members of the predominant phyla, Proteobacteria were rich in healthy fishes, but Bacteroidota and Firmicutes were significantly differentiated in healthy and ... diseased fish. Linear discriminant analysis identified two phyla (Bacteroidota, Firmicutes) and two genera (Flavobacterium, Allorhizobium) that were ...
Tópico(s): Gut microbiota and health
2022 - Frontiers Media | Frontiers in Microbiology
Xiaona Chen, Yan Zheng, Lili Liu, Rui Zhang, Xiaojiao Zhang, Cheng Peng, Yuehang Geng, Faliang Zhou, Ying‐Hao Han, Xinlin Hou,
... relative abundance of Clostridium_saccharobutylicum on day 7. Bacteroidota, Bacteroidia, Bacteroides, and Bacteroides_fragilis were the dominant ... were positively correlated with the relative abundance of Bacteroidota, Bacteroides, and Bacteroides_fragilis on day 7.The ... the dominant microbiota in SGA infants. Alpha diversity, Bacteroidota, Bacteroides, Bacteroides_fragilis, and Clostridium_saccharobutylicum found in ...
Tópico(s): Maternal Mental Health During Pregnancy and Postpartum
2022 - Frontiers Media | Frontiers in Microbiology
Bettina Glasl, Steven J. Robbins, Pedro R. Frade, Emma Marangon, Patrick W. Laffy, David G. Bourne, Nicole S. Webster,
... temperature). For example, a shift from Alphaproteobacteria to Bacteroidota-dominated seawater microbiomes occurred during summer, resulting in ... the sponge holobiont. A shift in the Firmicutes:Bacteroidota ratio was detected on macroalgae over summer with ...
Tópico(s): Aquaculture disease management and microbiota
2020 - Springer Nature | The ISME Journal
I‐Shuo Huang, Lee J. Pinnell, Jeffrey W. Turner, Hussain Abdulla, Lauren Boyd, Eric W. Linton, Paul V. Zimba,
... the presence of 51 prokaryotic phyla dominated by Bacteroidota, Chloroflexi, Cyanobacteria, Desulfobacteria, Firmicutes, Halobacteria, and Proteobacteria. The ... KR is significantly different to LMFS, in which Bacteroidota and Proteobacteria were most abundant. Twenty-three cyanobacterial ...
Tópico(s): Marine Biology and Ecology Research
2020 - Multidisciplinary Digital Publishing Institute | Biology
Xinxin You, Sheng Wang, Junhui Chen,
... phyla shifting from Firmicutes to Proteobacteria, Actinobacteria, and Bacteroidota. Network and hierarchical clustering analyses showed that the ... enhanced the interactions of dominant microbes (Proteobacteria and Bacteroidota) and accelerated the composting process. The biochar addition ...
Tópico(s): Microbial Fuel Cells and Bioremediation
2024 - Elsevier BV | Environment International
Subhash Yadav, Michel Koenen, Nicole J. Bale, Wietse Reitsma, Julia C. Engelmann, Kremena Stefanova, Jaap S. Sinninghe Damsté, Laura Villanueva,
... A2), Spirochaetota (strains M1 T , M2, and S2), Bacteroidota (strains B1 T , B2, S6, L6, SYP, and ... and DNA, respectively, while strains affiliated with Spirochaetota , Bacteroidota , Cloacimonadota , and Chloroflexota preferred to ferment less complex ...
Tópico(s): Methane Hydrates and Related Phenomena
2024 - BioMed Central | Microbiome
Julius Eyiuche Nweze, Vladimír Šustr, Andreas Brune, Roey Angel,
... communities of the two species differed significantly, with Bacteroidota dominating the hindguts of E. pulchripes and Proteobacteria ( ... common to the two species. Members of the Bacteroidota ( Bacteroidetes ) were the primary agents of complex carbon ...
Tópico(s): Nematode management and characterization studies
2024 - BioMed Central | Microbiome
Evan J. Pardue, Mariana G. Sartorio, Biswanath Jana, Nichollas E. Scott, Wandy L. Beatty, Juan C. Ortiz‐Marquez, Tim van Opijnen, Fong‐Fu Hsu, Robert F. Potter, Mario F. Feldman,
Bacteroidota are abundant members of the human gut microbiota that shape the enteric landscape by modulating host ... the Dma family is restricted to the phylum Bacteroidota. This study provides mechanistic insights into the regulation ...
Tópico(s): Genomics and Phylogenetic Studies
2024 - National Academy of Sciences | Proceedings of the National Academy of Sciences
D. G. Deryabin, Christina Lazebnik, Ludmila Vlasenko, Ilshat Karimov, Dianna Kosyan, А. М. Затевалов, Галимжан Дускаев,
... in chicken cecal microbiomes revealed two alternative patterns: Bacteroidota-dominated with decreased alpha biodiversity; and Bacillota-enriched, ... final body weight, and high EPEF values, while Bacteroidota-dominated microbiomes were negatively associated with poultry farming ...
Tópico(s): Gut microbiota and health
2024 - Multidisciplinary Digital Publishing Institute | Microorganisms
Binod Rayamajhee, Mark Willcox, Savitri Sharma, Ronnie Mooney, Constantinos Petsoglou, Paul R. Badenoch, Samendra P. Sherchan, Fiona L. Henriquez, Nicole Carnt,
... four major phyla: Pseudomonadota (previously known as Proteobacteria), Bacteroidota (previously known as Bacteroidetes), Actinomycetota (previously known as ... Indian corneal isolates (P < 0.017), and Bacteroidota was abundant in Australian water isolates (P < ...
Tópico(s): Ocular Infections and Treatments
2024 - Springer Nature | ISME Communications
Deepesh Panwar, A. Shubhashini, M. Kapoor,
... of host health and disease. In the HGM, Bacteroidota and Bacillota represent dominant bacterial phyla, which mainly ... the expression of specific gene clusters in selected Bacteroidota and Bacillota species. Both the phyla possess variable ...
Tópico(s): Gut microbiota and health
2023 - Elsevier BV | Biotechnology Advances