Comprehensive analysis of DNA methylation data with RnBeads
2014; Nature Portfolio; Volume: 11; Issue: 11 Linguagem: Inglês
10.1038/nmeth.3115
ISSN1548-7105
AutoresYassen Assenov, Fabian Müller, Pavlo Lutsik, Jörn Walter, Thomas Lengauer, Christoph Bock,
Tópico(s)Genetic Syndromes and Imprinting
ResumoRnBeads facilitates user-friendly analysis of large-scale DNA methylation data and fosters reproducibility and data sharing. RnBeads is a software tool for large-scale analysis and interpretation of DNA methylation data, providing a user-friendly analysis workflow that yields detailed hypertext reports ( http://rnbeads.mpi-inf.mpg.de/ ). Supported assays include whole-genome bisulfite sequencing, reduced representation bisulfite sequencing, Infinium microarrays and any other protocol that produces high-resolution DNA methylation data. Notable applications of RnBeads include the analysis of epigenome-wide association studies and epigenetic biomarker discovery in cancer cohorts.
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