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Genetic Assessment of Strain-Specific Sources of Lake Trout Recruitment in the Great Lakes

2003; Wiley; Volume: 132; Issue: 5 Linguagem: Inglês

10.1577/t02-092

1548-8659

Kevin S. Page, Kim T. Scribner, Kristine R. Bennett, Laura Garzel, Mary K. Burnham‐Curtis,

Genetic and phenotypic traits in livestock

Transactions of the American Fisheries SocietyVolume 132, Issue 5 p. 877-894 Articles Genetic Assessment of Strain-Specific Sources of Lake Trout Recruitment in the Great Lakes Kevin S. Page, Corresponding Author Kevin S. Page [email protected] Department of Fisheries and Wildlife, Michigan State University, 13 Natural Resources Building, East Lansing, Michigan, 48824-1222 USA[email protected]Search for more papers by this authorKim T. Scribner, Kim T. Scribner Department of Fisheries and Wildlife, Michigan State University, 13 Natural Resources Building, East Lansing, Michigan, 48824-1222 USASearch for more papers by this authorKristine R. Bennett, Kristine R. Bennett Department of Fisheries and Wildlife, Michigan State University, 13 Natural Resources Building, East Lansing, Michigan, 48824-1222 USASearch for more papers by this authorLaura M. Garzel, Laura M. Garzel Department of Fisheries and Wildlife, Michigan State University, 13 Natural Resources Building, East Lansing, Michigan, 48824-1222 USASearch for more papers by this authorMary K. Burnham-Curtis, Mary K. Burnham-Curtis U.S. Geological Survey, Biological Resources Division, Great Lakes Science Center, 1451 Green Road, Ann Arbor, Michigan, 48105 USASearch for more papers by this author Kevin S. Page, Corresponding Author Kevin S. Page [email protected] Department of Fisheries and Wildlife, Michigan State University, 13 Natural Resources Building, East Lansing, Michigan, 48824-1222 USA[email protected]Search for more papers by this authorKim T. Scribner, Kim T. Scribner Department of Fisheries and Wildlife, Michigan State University, 13 Natural Resources Building, East Lansing, Michigan, 48824-1222 USASearch for more papers by this authorKristine R. Bennett, Kristine R. Bennett Department of Fisheries and Wildlife, Michigan State University, 13 Natural Resources Building, East Lansing, Michigan, 48824-1222 USASearch for more papers by this authorLaura M. Garzel, Laura M. Garzel Department of Fisheries and Wildlife, Michigan State University, 13 Natural Resources Building, East Lansing, Michigan, 48824-1222 USASearch for more papers by this authorMary K. Burnham-Curtis, Mary K. Burnham-Curtis U.S. Geological Survey, Biological Resources Division, Great Lakes Science Center, 1451 Green Road, Ann Arbor, Michigan, 48105 USASearch for more papers by this author First published: 09 January 2011 https://doi.org/10.1577/T02-092Citations: 29 Present address: Minnesota Department of Natural Resources, Fisheries Research Unit, 1601 Minnesota Drive, Brainerd, Minnesota 56401-3971, USA. Present address: U.S. Fish and Wildlife Service, National Forensic Laboratory, 1490 East Main Street, Ashland, Oregon 97520, USA. Read the full textAboutPDF ToolsRequest permissionExport citationAdd to favoritesTrack citation ShareShare Give accessShare full text accessShare full-text accessPlease review our Terms and Conditions of Use and check box below to share full-text version of article.I have read and accept the Wiley Online Library Terms and Conditions of UseShareable LinkUse the link below to share a full-text version of this article with your friends and colleagues. Learn more.Copy URL Share a linkShare onEmailFacebookTwitterLinkedInRedditWechat Abstract Populations of wild lake trout Salvelinus namaycush have been extirpated from nearly all their historical habitats across the Great Lakes. Efforts to restore self-sustaining lake trout populations in U.S. waters have emphasized the stocking of coded-wire-tagged juveniles from six hatchery strains (Seneca Lake, Lewis Lake, Green Lake, Apostle Islands, Isle Royale, and Marquette) into vacant habitats. Strain-specific stocking success has historically been based on estimates of the survival and catch rates of coded-wire-tagged adults returning to spawning sites. However, traditional marking methods and estimates of relative strain abundance provide no means of assessing strain fitness (i.e., the realized contributions to natural recruitment) except by assuming that young-of-the-year production is proportional to adult spawner abundance. We used microsatellite genetic data collected from six hatchery strains with likelihood-based individual assignment tests (IA) and mixed-stock analysis (MSA) to identify the strain composition of young of the year recruited each year. We show that strain classifications based on IA and MSA were concordant and that the accuracy of both methods varied based on strain composition. Analyses of young-of-the-year lake trout samples from Little Traverse Bay (Lake Michigan) and Six Fathom Bank (Lake Huron) revealed that strain contributions differed significantly from estimates of the strain composition of adults returning to spawning reefs. The Seneca Lake strain contributed the majority of juveniles produced on Six Fathom Bank and more young of the year than expected within Little Traverse Bay. Microsatellite markers provided a method for accurately classifying the lake trout hatchery strains used for restoration efforts in the Great Lakes and for assessment of strain-specific reproductive success. References B. Angers and L. Bernatchez, 1996 Usefulness of heterologous microsatellites obtained from brook charr, Salvelinus fontinalis Mitchill, in other Salvelinus species, Molecular Ecology, 5: Pages 317–319. B. Angers, L. Bernatchez, A. Angers and L. Desgroseillers, 1995 Specific microsatellite loci for brook charr reveal strong population subdivision on a microgeographic scale, Journal of Fish Biology, 7: Pages 177–185, (Supplement A). D. R. Bernard and J. E. Clark, 1996 Estimating salmon harvest with coded-wire tags, Canadian Journal of Fisheries and Aquatic Sciences, 53: Pages 2323–2332. L. Bernatchez and P. Duchesne, 2000 Individual-based genotype analysis in studies of parentage and population assignment: how many loci, how many alleles?, Canadian Journal of Fisheries and Aquatic Sciences, 57: Pages 1–12. J. A. Blanchong, K. T. Scribner and S. R. Winterstein, 2002 Assignment of individuals to populations: Bayesian methods and multilocus genotypes, Journal of Wildlife Management, 66: Pages 321–329. H. L. Blankenship, R. M. Buckley, P. K. Bergman and F. Haw, 1989 Analysis of external coded-wire tags as assessment techniques, Bulletin of Marine Science, 44: Pages 1065. C. R. Bronte, S. T. Schram, J. H. Selgeby and B. L. Swanson, 2002 Reestablishing a spawning population of lake trout in Lake Superior with fertilized eggs in artificial turf incubators, North American Journal of Fisheries Management, 22: Pages 796–805. E. H Brown Jr, G. W. Eck, N. R. Foster, R. M. Horrall and C. E. Coberly, 1981 Historical evidence for discrete stocks of lake trout (Salvelinus namaycush) in Lake Michigan, Canadian Journal of Fisheries and Aquatic Sciences, 38: Pages 1747–1758. M. K. Burnham-Curtis, 1993. In Intralacustrine speciation of Salvelinus namaycush in Lake Superior: an investigation of genetic and morphological variation and evolution in the Laurentian Great Lakes, Doctoral dissertation. University of Michigan, Ann Arbor. M. K. Burnham-Curtis, C. C. Krueger, D. R. Schreiner, J. E. Johnson, T. J. Stewart, R. M. Horrall, W. R. MacCallum, R. Kenyon and R. E. Lange, 1995 Genetic strategies for lake trout rehabilitation: a synthesis, Journal of Great Lakes Research, 21: Pages 477–486, (Supplement 1). C. E. Coberly and R. M. Horrall, 1982. In A strategy for re-establishing self-sustaining lake trout stocks in Illinois waters of Lake Michigan, Institute for Environmental Studies, Marine Studies Center, University of Wisconsin, Illinois Coastal Zone Management Development Project, Report 42, Madison. J. M. Cornuet, S. Piry, G. Luikart, A. Estoup and M. Solignac, 1999 New methods employing multilocus genotypes to select or exclude populations as origin of individuals, Genetics, 153: Pages 1989–2000. C. Coronado and R. Hilborn, 1998 Spatial and temporal factors affecting survival in coho salmon (Oncorhynchus kisutch) in the Pacific Northwest, Canadian Journal of Fisheries and Aquatic Sciences, 55: Pages 2067–2077. E. M. Debevec, R. B. Gates, M. Masuda, J. Pella, J. H. Reynolds and L. W. Seeb, 2000 SPAM (version 3.2): statistics program for analyzing mixtures, Journal of Heredity, 91: Pages 509–510. T. R. Dehring, A. F. Brown, C. H. Daugherty and S. R. Phelps, 1981 Survey of genetic variation among eastern Lake Superior lake trout, Canadian Journal of Fisheries and Aquatic Sciences, 38: Pages 1738–1746. R. L. Eshenroder, C. R. Bronte and J. W. Peck, 1995b Comparison of lake trout egg survival at inshore and offshore and shallow-water and deepwater sites in Lake Superior, Journal of Great Lakes Research, 21: Pages 313–322, (Supplement 1). R. L. Eshenroder, N. R. Payne, J. E. Johnson, C. Bowen II and M. P. Ebener, 1995a Lake trout rehabilitation in Lake Huron, Journal of Great Lakes Research, 21: Pages 108–127, (Supplement 1). C. M. Fetterolf, 1980 Why the Great Lakes Fisheries Commission and why a sea lamprey international symposium?, Canadian Journal of Fisheries and Aquatic Sciences, 37: Pages 1588–1593. J. D. Fitzsimons, S. B. Brown, D. C. Honeywell and J. G. Hnath, 1999 A review of early mortality syndrome (EMS) in Great Lakes salmonids: relationships with thiamine deficiency, Ambio, 28: Pages 9–15. J. D. Fitzsimons, L. Vandenbyllaardt and S. B. Brown, 2001 The use of thiamine and thiamine antagonists to investigate the etiology of early mortality syndrome in lake trout (Salvelinus namaycush), Aquatic Toxicology, 52: Pages 229–239. R. Frankham, 1996 Relationship of genetic variation to population size in wildlife, Conservation Biology, 10: Pages 1500–1508. J. L. Goode, 1884. In The fisheries and fishery industries of the United States, Section 1: Natural history of useful aquatic animals, Report to the U.S. Commission on Fish and Fisheries, Washington, D.C. J. L. Goodier, 1981 Native lake trout (Salvelinus namaycush) stocks in the Canadian waters of Lake Superior prior to 1955, Canadian Journal of Fisheries and Aquatic Sciences, 38: Pages 1724–1737. J. Goudet, 1995 FSTAT (version 1.2): a computer program to calculate F-statistics, Journal of Heredity, 86: Pages 485–486. P. M. Grewe and P. D. N. Hebert, 1988 Mitochondrial DNA diversity among broodstocks of the lake trout, Salvelinus namaycush, Canadian Journal of Fisheries and Aquatic Sciences, 45: Pages 2114–2122. P. M. Grewe, C. C. Krueger, J. E. Marsden, C. F. Aquadro and B. May, 1994 Hatchery origins of naturally produced lake trout fry captured in Lake Ontario: temporal and spatial variability based on allozyme and mitochondrial DNA data, Transactions of the American Fisheries Society, 123: Pages 309–320. B. Guinand, K. T. Scribner, K. S. Page and M. K. Burnham-Curtis, 2003 Genetic variation over space and time: Analyses of extinct and remnant lake trout populations in the upper Great Lakes, Proceedings of the Royal Society of London, 270: Pages 425–433. J. M. Gunn, 1995 Spawning behavior of lake trout: effects on colonization ability, Journal of Great Lakes Research, 21: Pages 323–329, (Supplement 1). M. J. Hansen, J. W. Peck, R. G. Schorfhaar, J. H. Selgeby, D. R. Schreiner, S. T. Schram, B. L. Swanson, W. R. McCallum, M. K. Burnham-Curtis, G. L. Curtis, J. W. Heinrich and R. J. Young, 1995 Lake trout (Salvelinus namaycush) populations in Lake Superior and their restoration in 1959–1993, Journal of Great Lakes Research, 21: Pages 152–175, (Supplement 1). M. E. Holey, R. W. Rybicki, J. E. Marsden, G. W. Eck, D. Lavis, M. L. Toneys, T. Trudeau, E. H. Brown Jr. and R. M. Horrall, 1995 Progress toward lake trout restoration in Lake Michigan, Journal of Great Lakes Research, 21: Pages 128–151, (Supplement 1). W. H. Horns, 1985 Differences in early development among lake trout (Salvelinus namaycush) populations, Canadian Journal of Fisheries and Aquatic Sciences, 42: Pages 737–743. P. E. Ihssen, J. M. Casselman, G. W. Martin and R. B. Phillips, 1988 Biochemical genetic differentiation of lake trout (Salvelinus namaycush) stocks of the Great Lakes region, Canadian Journal of Fisheries and Aquatic Sciences, 45: Pages 1018–1029. H. L. Kincaid, C. C. Krueger and B. May, 1993 Preservation of genetic variation in the Green Lake strain lake trout derived from remnant domestic and feral populations, North American Journal of Fisheries Management, 13: Pages 318–325. C. C. Krueger, A. J. Gharrett, T. R. Dehring and F. W. Allendorf, 1981 Genetic aspects of fisheries rehabilitation programs, Canadian Journal of Fisheries and Aquatic Sciences, 38: Pages 1877–1881. C. C. Krueger, R. M. Horrall and H. Gruenthal, 1983. In Strategy for the use of lake trout strains in Lake Michigan, Report 17 of the Genetics Subcommittee to the Lake Trout Technical Committee for Lake Michigan of the Great Lakes Fishery Commission, Madison, Wisconsin. C. C. Krueger and P. E. Ihssen, 1995 Review of genetics of lake trout in the Great Lakes: history, molecular genetics, physiology, strain comparisons, and restoration management, Journal of Great Lakes Research, 21: Pages 348–363, (Supplement 1). C. C. Krueger, J. E. Marsden, H. L. Kincaid and B. May, 1989 Genetic differentiation among lake trout strains stocked in Lake Ontario, Transactions of the American Fisheries Society, 118: Pages 317–330. R. Lande and G. F. Barrowclough, 1987, " Effective population size, genetic variation, and their use in population management", Pages 87–123. Edited by: M. E. Soulé. In Viable populations for conservation, Cambridge University Press, New York. A. H. Lawrie, 1978 The fish community of Lake Superior, Journal of Great Lakes Research, 4: Pages 513–549. A. H. Lawrie and J. F. Rahrer, 1973. In Lake Superior: a case history of the lake and its fishes, Great Lakes Fishery Commission Technical Report 19. G. Luikart and J. M. Cornuet, 1999 Estimating the effective number of breeders from heterozygosity excess in progeny, Genetics, 151: Pages 1211–1216. C. Marlowe and C. Busack, 1995. In The effect of decreasing sample size on the precision of GSI stock composition estimates for chinook salmon (Oncorhynchus tshawytscha) using data from the Washington coastal and strain of Juan de Fuca troll fisheries in 1989–1990, Washington Department of Fish and Wildlife, Project Report 2. J. E. Marsden, C. C. Krueger, P. M. Grewe, H. L. Kincaid and B. May, 1993 Genetic comparison of naturally spawned and artificially propagated lake trout fry: evaluation of stocking strategy for species rehabilitation, North American Journal of Fisheries Management, 13: Pages 304–317. J. E. Marsden, C. C. Krueger and B. May, 1989 Identification of parental origins of naturally produced lake trout in Lake Ontario: application of mixed-stock analysis to a second generation, North American Journal of Fisheries Management, 9: Pages 257–268. J. E. Marsden, D. L. Perkins and C. C. Krueger, 1995 Recognition of spawning areas by lake trout: deposition and survival of eggs on small, man-made rock piles, Journal of Great Lakes Research, 21: Pages 330–336, (Supplement 1). R. T. Nester and T. P. Poe, 1984 First evidence of successful reproduction of planted lake trout in Lake Huron, North American Journal of Fisheries Management, 4: Pages 126–128. J. B. Olsen, P. Bentzen and J. E. Seeb, 1998 Characterization of seven microsatellite loci derived from pink salmon, Molecular Ecology, 7: Pages 1087–1089. R. O'Gorman, J. H. Elrod and C. P. Schneider, 1998 Reproductive potential and fecundity of lake trout strains in southern and eastern Lake Ontario, 1977–1994, Journal of Great Lakes Research, 24: Pages 131–144. P. T. O'Reilly, L. C. Hamilton, S. K. McConnell and J. W. Wright, 1996 Rapid analysis of genetic variation in Atlantic salmon (Salmo salar) by PCR multiplexing of dinucleotide and tetranucleotide microsatellites, Canadian Journal of Fisheries and Aquatic Sciences, 53: Pages 2292–2298. D. Paetkau and C. Strobeck, 1995 Microsatellite analysis of population structure in Canadian polar bears, Molecular Ecology, 4: Pages 347–354. K. S. Page, 2001. In Genetic diversity and interrelationships of wild and hatchery lake trout in the upper Great Lakes: inferences for broodstock management and development of restoration strategies, Master's thesis. Michigan State University, East Lansing. J. W. Peck, 1975. In Brief life history accounts of five commercial salmonid fishes in Lake Superior, Michigan Department of Natural Resources, Fisheries Research Publication 1821, Lansing. J. J. Pella and G. B. Milner, 1987, " Use of genetic marks in stock composition analysis", Pages 247–276. Edited by: N. Ryman, F. Utter. In Population genetics and fishery management, University of Washington Press, Seattle. D. L. Perkins, J. D. Fitzsimons, J. E. Marsden, C. C. Krueger and B. May, 1995 Differences in reproduction among hatchery strains of lake trout at eight spawning areas in Lake Ontario: genetic evidence from mixed-stock analysis, Journal of Great Lakes Research, 21: Pages 364–374, (Supplement 1). C. Potvin and L. Bernatchez, 2001 Lacustrine spatial distribution of landlocked Atlantic salmon populations assessed across generations by multilocus individual assignment and mixed-stock analysis, Molecular Ecology, 10: Pages 2375–2388. D. C. Queller and K. F. Goodnight, 1989 Estimating relatedness using genetic markers, Evolution, 43: Pages 258–275. T. P. Quinn, R. S. Nemeth and D. O. McIsaac, 1991 Homing and straying patterns of fall chinook salmon in the lower Columbia River, Transactions of the American Fisheries Society, 120: Pages 150–156. B. Rannala and J. L. Mountain, 1997 Detecting immigration by using multilocus genotypes, Proceedings of the National Academy of Sciences of the USA, 94: Pages 9197–9102. M. Raymond and F. Rousset, 1995 GENEPOP, version 1.2: population genetics software for exact tests and ecumenicism, Journal of Heredity, 86: Pages 248–249. K. T. Scribner, P. A. Crane, W. J. Spearman and L. W. Seeb, 1998 DNA and allozyme markers provide concordant estimates of population differentiation: analyses of U.S. and Canadian populations of Yukon River fall-run chum salmon, Canadian Journal of Fisheries and Aquatic Sciences, 55: Pages 1748–1758. K. T. Scribner, J. R. Gust and R. L. Fields, 1996 Isolation and characterization of novel microsatellite loci: cross-species amplification and population genetic applications, Canadian Journal of Fisheries and Aquatic Sciences, 53: Pages 685–693. L. D. Shaul, 1994. In Harvest, escapements, migratory patterns, and survival of coho salmon in southeast Alaska based on coded wire tagging, 1991–1992, Alaska Department of Fish and Game, Technical Report 94. R. R. Sokal and F. J. Rohlf, 2001. In Biometry,, Freeman, San Francisco, California, 3rd edition. B. L. Swanson and R. B. Swedberg, 1980 Decline and recovery of the Lake Superior Gull Island Reef lake trout (Salvelinus namaycush) population and the role of sea lampey (Petromyzon marinus) predation, Canadian Journal of Fisheries and Aquatic Sciences, 37: Pages 2074–2080. E. B. Taylor, Z. Redenbach, A. B. Costello, S. M. Pollard and C. J. Pacas, 2001 Nested analysis of genetic diversity in northwestern North America, Dolly Varden (Salvelinus malma), and bull trout (Salvelinus confluentus), Canadian Journal of Fisheries and Aquatic Sciences, 58: Pages 406–420. J. Thomson, 1883, " A trout trip to St. Ignance Island", Page 299. Edited by: C. F. Orvis, A. N. Cheney. In Fishing with the fly: Sketches by lovers of the art with illustrations of standard flies, C. F. Orvis, Manchester, Vermont. F. Utter and N. Ryman, 1993 Genetic markers and mixed stock fisheries, Fisheries, 188, Pages 11–21. L. Visscher, 1983. In Lewis Lake lake trout, U.S. Fish and Wildlife Service, Denver. P. Waser and C. Strobeck, 1998 Genetic signatures of inter-population dispersal, Trends in Ecology and Evolution, 13: Pages 43–44. B. S. Weir and C. C. Cockerham, 1984 Estimating F-statistics for the analysis of population structure, Evolution, 38: Pages 1358–1370. C. C. Wilson and P. D. N. Hebert, 1996 Phylogeographic origins of lake trout (Salvelinus namaycush) in eastern North America, Canadian Journal of Fisheries and Aquatic Sciences, 53: Pages 2764–2775. S. Wright, 1992 Guidelines for selecting regulations to manage open-access fisheries for natural populations of anadromous and resident trout in stream habitats, North American Journal of Fisheries Management, 12: Pages 517–527. Citing Literature Volume132, Issue5September 2003Pages 877-894 ReferencesRelatedInformation