Artigo Acesso aberto Revisado por pares

The genome portal of the Department of Energy Joint Genome Institute: 2014 updates

2013; Oxford University Press; Volume: 42; Issue: D1 Linguagem: Inglês

10.1093/nar/gkt1069

ISSN

1362-4962

Autores

Henrik Nordberg, Michael Cantor, Serge Dusheyko, Susan Hua, Alexander Poliakov, Igor Shabalov, Tatyana I. Smirnova, Igor V. Grigoriev, Inna Dubchak,

Tópico(s)

Genomics and Phylogenetic Studies

Resumo

The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a national user facility, serves the diverse scientific community by providing integrated high-throughput sequencing and computational analysis to enable system-based scientific approaches in support of DOE missions related to clean energy generation and environmental characterization. The JGI Genome Portal (http://genome.jgi.doe.gov) provides unified access to all JGI genomic databases and analytical tools. The JGI maintains extensive data management systems and specialized analytical capabilities to manage and interpret complex genomic data. A user can search, download and explore multiple data sets available for all DOE JGI sequencing projects including their status, assemblies and annotations of sequenced genomes. Here we describe major updates of the Genome Portal in the past 2 years with a specific emphasis on efficient handling of the rapidly growing amount of diverse genomic data accumulated in JGI.

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