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Genetic Interpretation of Broad-Scale Microsatellite Polymorphism in Odd-Year Pink Salmon

1998; Wiley; Volume: 127; Issue: 4 Linguagem: Inglês

10.1577/1548-8659(1998)127 2.0.co;2

1548-8659

Jeffrey B. Olsen, Lisa W. Seeb, Paul Bentzen, James E. Seeb,

Fish Ecology and Management Studies

Transactions of the American Fisheries SocietyVolume 127, Issue 4 p. 535-550 Article Genetic Interpretation of Broad-Scale Microsatellite Polymorphism in Odd-Year Pink Salmon Jeffrey B. Olsen, Corresponding Author Jeffrey B. Olsen [email protected] Alaska Department of Fish and Game, Genetics Program, 333 Raspberry Road, Anchorage, Alaska, 99518 USA[email protected]Search for more papers by this authorLisa W. Seeb, Lisa W. Seeb Alaska Department of Fish and Game, Genetics Program, 333 Raspberry Road, Anchorage, Alaska, 99518 USASearch for more papers by this authorPaul Bentzen, Paul Bentzen Marine Molecular Biotechnology Laboratory, University of Washington, 3707 Brooklyn Avenue Northeast, Seattle, Washington, 98105-6715 USASearch for more papers by this authorJames E. Seeb, James E. Seeb Alaska Department of Fish and Game, Genetics Program, USASearch for more papers by this author Jeffrey B. Olsen, Corresponding Author Jeffrey B. Olsen [email protected] Alaska Department of Fish and Game, Genetics Program, 333 Raspberry Road, Anchorage, Alaska, 99518 USA[email protected]Search for more papers by this authorLisa W. Seeb, Lisa W. Seeb Alaska Department of Fish and Game, Genetics Program, 333 Raspberry Road, Anchorage, Alaska, 99518 USASearch for more papers by this authorPaul Bentzen, Paul Bentzen Marine Molecular Biotechnology Laboratory, University of Washington, 3707 Brooklyn Avenue Northeast, Seattle, Washington, 98105-6715 USASearch for more papers by this authorJames E. Seeb, James E. Seeb Alaska Department of Fish and Game, Genetics Program, USASearch for more papers by this author First published: 09 January 2011 https://doi.org/10.1577/1548-8659(1998)127 2.0.CO;2Citations: 33 Present address: Marine Molecular Biotechnology Laboratory, University of Washington, 3707 Brooklyn Avenue Northeast, Seattle, Washington 98105-6715, USA. Read the full textAboutPDF ToolsRequest permissionExport citationAdd to favoritesTrack citation ShareShare Give accessShare full text accessShare full-text accessPlease review our Terms and Conditions of Use and check box below to share full-text version of article.I have read and accept the Wiley Online Library Terms and Conditions of UseShareable LinkUse the link below to share a full-text version of this article with your friends and colleagues. Learn more.Copy URL Share a linkShare onEmailFacebookTwitterLinkedInRedditWechat Abstract We examined genetic variation at five microsatellite loci in 12 odd-year populations and one even-year population of pink salmon Oncorhynchus gorbuscha from six geographic regions of North America. The degree of polymorphism varied widely among loci. The total number of alleles in the odd-year samples varied from 4 (Oneμ3) to 53 (Ssa85). A probability test revealed significant heterogeneity in allele frequencies among all odd-year samples and among pooled odd-year samples from six regions. We compared estimates of a standard index of population structure (θ) based on variance in allele frequency with a new index suggested for microsatellites (ρST) based on variance in allele size. Our results suggest is a better estimator of intralineage (odd-year × odd-year) population structure, whereas is best suited for estimating interlineage (odd-year × even-year) population structure. The difference in performance of and for estimating intralineage and interlineage population structure suggests high migration rates and possibly recent low divergence times are dominant influences on genetic population structure in odd-year pink salmon. We showed statistical support for genetic isolation by distance and geographically correlated allele frequency clines, suggesting broad-scale gene flow is best described by a linear stepping-stone model. An analysis of molecular variation showed weak but significant regional structuring under two different population grouping schemes. Our results suggest broad-scale population aggregations of odd-year pink salmon are temporally stable but that differentiation is weak, presumably due to migration. References ABI (Applied Biosystems Inc.), 1994. In Genotyper 1.1 DNA fragment analysis software, Users manual revision A. Perkin-Elmer, Foster City, California. ABI (Applied Biosystems Inc.), 1996. In ABI Prism GeneScan™ analysis software, version 2.1 users manual, Perkin-Elmer, Foster City, California. N. 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