Long, polymorphic microsatellites in simple organisms
1996; Royal Society; Volume: 263; Issue: 1367 Linguagem: Inglês
10.1098/rspb.1996.0033
ISSN1471-2954
AutoresDawn Field, Christopher Wills,
Tópico(s)Plant and Fungal Interactions Research
ResumoRestricted accessMoreSectionsView PDF ToolsAdd to favoritesDownload CitationsTrack Citations ShareShare onFacebookTwitterLinked InRedditEmail Cite this article Field Dawn and Wills Christopher 1996Long, polymorphic microsatellites in simple organismsProc. R. Soc. Lond. B.263209–215http://doi.org/10.1098/rspb.1996.0033SectionRestricted accessArticleLong, polymorphic microsatellites in simple organisms Dawn Field Google Scholar Find this author on PubMed Search for more papers by this author and Christopher Wills Google Scholar Find this author on PubMed Search for more papers by this author Dawn Field Google Scholar Find this author on PubMed and Christopher Wills Google Scholar Find this author on PubMed Published:22 February 1996https://doi.org/10.1098/rspb.1996.0033AbstractWe have examined the phylogenetic distribution of the longest, perfect microsatellites in GenBank. Despite the large contributions of model higher-eukaryotic organisms to GenBank, the selective cloning of long microsatellites from these organisms as genetic markers, and the relative lack of concentration on the microsatellites in lower eukaryotes and prokaryotes, we found that simple organisms, defined here as slime molds, fungi, protists, prokaryotes, viruses, organelles and plasmids, contributed 78 of the 375 examined sequences. These 78 simple-organism microsatellites are characterized predominantly by trinucleotide repeats, nearly half of which lie in exons, and in general show a bias towards A + T rich motifs. Simple-organism microsatellites represented more than once in GenBank displayed length polymorphisms when independent clones were compared. These facts collectively raise speculation as to the role of these 'junk' sequences in such highly economical genomes, especially when precise changes in long microsatellites are known to regulate critical virulence factors in several prokaryotes. Regardless of their biological significance, simple-organism microsatellites may provide a general source of molecular markers to track disease outbreaks and the evolution of microorganisms in unprecedented detail.FootnotesThis text was harvested from a scanned image of the original document using optical character recognition (OCR) software. As such, it may contain errors. Please contact the Royal Society if you find an error you would like to see corrected. Mathematical notations produced through Infty OCR. 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