MARMOTS ON GREAT BASIN MOUNTAINTOPS: USING GENETICS TO TEST A BIOGEOGRAPHIC PARADIGM
2005; Wiley; Volume: 86; Issue: 8 Linguagem: Inglês
10.1890/04-1227
ISSN1939-9170
AutoresChris H. Floyd, Dirk H. Van Vuren, Bernie May,
Tópico(s)Wildlife Ecology and Conservation
ResumoEcologyVolume 86, Issue 8 p. 2145-2153 Article MARMOTS ON GREAT BASIN MOUNTAINTOPS: USING GENETICS TO TEST A BIOGEOGRAPHIC PARADIGM Chris H. Floyd, Chris H. Floyd Department of Wildlife, Fish, and Conservation Biology, University of California, Davis, California 95616 USA Present address: Department of Biology, Phillips Hall 330, University of Wisconsin, Eau Claire, Wisconsin 54701 USA. E-mail: [email protected]Search for more papers by this authorDirk H. Van Vuren, Dirk H. Van Vuren Department of Wildlife, Fish, and Conservation Biology, University of California, Davis, California 95616 USASearch for more papers by this authorBernie May, Bernie May Department of Animal Science, University of California, Davis, California 95616 USASearch for more papers by this author Chris H. Floyd, Chris H. Floyd Department of Wildlife, Fish, and Conservation Biology, University of California, Davis, California 95616 USA Present address: Department of Biology, Phillips Hall 330, University of Wisconsin, Eau Claire, Wisconsin 54701 USA. E-mail: [email protected]Search for more papers by this authorDirk H. Van Vuren, Dirk H. Van Vuren Department of Wildlife, Fish, and Conservation Biology, University of California, Davis, California 95616 USASearch for more papers by this authorBernie May, Bernie May Department of Animal Science, University of California, Davis, California 95616 USASearch for more papers by this author First published: 01 August 2005 https://doi.org/10.1890/04-1227Citations: 37 Corresponding Editor: C. W. Fox Read the full textAboutPDF ToolsRequest permissionExport citationAdd to favoritesTrack citation ShareShare Give accessShare full text accessShare full-text accessPlease review our Terms and Conditions of Use and check box below to share full-text version of article.I have read and accept the Wiley Online Library Terms and Conditions of UseShareable LinkUse the link below to share a full-text version of this article with your friends and colleagues. Learn more.Copy URL Share a linkShare onEmailFacebookTwitterLinkedInRedditWechat Abstract Boreal mammals in the Great Basin have long been viewed as island-bound Pleistocene relicts because they occupy island-like patches of montane habitat separated by desert lowlands that presumably are impermeable to dispersal. Recent work, however, raised the possibility that dispersal among mountain ranges is an important process in the biogeography of boreal mammals in the Great Basin. We test this proposition using genetic variation in a representative species, the yellow-bellied marmot (Marmota flaviventris). A total of 332 marmots was sampled from 10 ranges and genotyped at six microsatellite loci. If the intervening desert lowlands are impermeable barriers to dispersal, then there should be no relationship between genetic distance and geographic distance among mountaintop populations, and genetic diversity should be diminished because gene flow would not be available to replace alleles lost over thousands of generations of isolation. Our results did not support these predictions. There was a strong correlation between genetic and geographic distance, demonstrating an isolation-by-distance pattern, and genetic diversity was high. Our results suggest that marmot populations in the Great Basin may be linked by dispersal, providing a mechanism to replenish genetic variation lost by drift. However, global climate change over the next several decades could make the desert lowlands more difficult to traverse, eventually transforming the boreal faunas of Great Basin mountaintops into the isolated relicts they were originally portrayed to be. Literature Cited Armitage, K. B. . 1991. Social and population dynamics of yellow-bellied marmots: results from long-term research. Annual Review of Ecology and Systematics 22: 379–407. Belfiore, N. M. and B. May . 2000. Variable microsatellite loci in red swamp crayfish, Procambarus clarkii, and their characterization in other crayfish taxa. Molecular Ecology 9: 2231–2234. Britten, H. B., P. F. Brussard, D. D. Murphy, and P. R. Ehrlich . 1995. A test of isolation-by-distance in central Rocky Mountain and Great Basin populations of Edith's checkerspot butterfly (Euphyryas editha). Journal of Heredity 86: 204–210. Brown, J. H. . 1971. Mammals on mountaintops: nonequilibrium insular biogeography. American Naturalist 105: 467–478. Brown, J. H. and A. Kodric-Brown . 1977. Turnover rates in insular biogeography: effect of immigration on extinction. Ecology 58: 445–449. Carmichael, L. E., J. A. Nagy, N. C. Larter, and C. Strobeck . 2001. Prey specialization may influence patterns of gene flow in wolves of the Canadian Northwest. Molecular Ecology 10: 2787–2798. Cornelius, C., H. Cofré, and P. A. Marquet . 2000. Effects of habitat fragmentation on bird species in a relict temperate forest in semiarid Chile. Conservation Biology 14: 534–543. Cornuet, J. M., S. Piry, G. Luikart, A. Estoup, and M. Solignac . 1999. New methods employing multilocus genotypes to select or exclude populations as origins of individuals. Genetics 153: 1989–2000. 〈http://www.montpellier.inra.fr/CBGP/softwares/〉. Eldridge, M. D B., J. M. King, A. K. Loupis, P. B S. Spencer, A. C. Taylor, L. C. Pope, and G. P. Hall . 1999. Unprecedented low levels of genetic variation and inbreeding depression in an island population of the black-footed rock-wallaby. Conservation Biology 13: 531–541. El Mousadik, A. and R. J. Petit . 1996. High level of genetic differentiation for allelic richness among populations of the argan tree [Argania spinosa (L.) Skeels] endemic to Morocco. Theoretical and Applied Genetics 92: 832–839. Floyd, C. H. . 2003. Ecological genetics of dispersal and mating system in populations of yellow-bellied marmots, Marmota flaviventris. Dissertation. University of California, Davis, California, USA. Floyd, C. H. . 2004. Marmot distribution and habitat associations in the Great Basin. Western North American Naturalist 64: 471–481. Frankham, R. . 1997. Do island populations have less genetic variation than mainland populations? Heredity 78: 311–327. Frankham, R., J. D. Ballou, and D. A. Briscoe . 2002. Introduction to conservation genetics. Cambridge University Press, Cambridge, UK. Gagneux, P., C. Boesch, and D. S. Woodruff . 1997. Microsatellite scoring errors associated with noninvasive genotyping based on nuclear DNA amplified from shed hair. Molecular Ecology 6: 861–868. Goldstein, D. B. and D. D. Pollock . 1997. Launching microsatellites: a review of mutation processes and methods of phylogenetic inference. Journal of Heredity 88: 335–342. Goodman, S. J., H. B. Tamate, R. Wilson, J. Nagata, S. Tatsuzawa, G. M. Swanson, J. M. Pemberton, and D. R. McCullough . 2001. Bottlenecks, drift and differentiation: the population structure and demographic history of sika deer (Cervus nippon) in the Japanese archipelago. Molecular Ecology 10: 1357–1370. Goossens, B., L. Chikhi, P. Taberlet, L. P. Waits, and D. Allainé . 2001. Microsatellite analysis of genetic variation among and within Alpine marmot populations in the French Alps. Molecular Ecology 10: 41–52. Goossens, B., L. Graziani, L. P. Waits, E. Farand, S. Magnolon, J. Coulon, M-C. Bel, P. Taberlet, and D. Allainé . 1998. Extra-pair paternity in the monogamous Alpine marmot revealed by nuclear DNA microsatellite analysis. Behavioral Ecology and Sociobiology 43: 281–288. Gottfried, M., H. Pauli, K. Reiter, and G. Grabherr . 1999. A fine-scaled predictive model for changes in species distribution patterns of high mountain plants induced by climate warming. Diversity and Distributions 5: 241–251. Goudet, J. . 1995. FSTAT (version 1.2): a computer program to calculate F-statistics. Journal of Heredity 86: 485–486. 〈http://www2.unil.ch/izea/softwares/fstat.html〉. Grayson, D. K. . 1993. The desert's past: a natural prehistory of the Great Basin. Smithsonian Institution Press, Washington, D.C., USA. Grayson, D. K. and D. B. Madsen . 2000. Biogeographic implications of recent low-elevation recolonization by Neotoma cinerea in the Great Basin. Journal of Mammalogy 81: 1100–1105. Hanslik, S. and L. Kruckenhauser . 2000. Microsatellite loci for two European sciurid species (Marmot marmota, Spermophilus citellus). Molecular Ecology 9: 2163–2165. Hartl, D. L. and A. G. Clark . 1997. Principles of population genetics. Sinauer Associates, Sunderland, Massachusetts, USA. Hill, J. K., C. D. Thomas, R. Fox, M. G. Telfer, S. G. Willis, J. Asher, and B. Huntley . 2002. Responses of butterflies to twentieth century climate warming: implications for future ranges. Proceedings of the Royal Society of London Series B 269: 2163–2171. Hutchison, D. W. and A. R. Templeton . 1999. Correlation of pairwise genetic and geographic distance measures: inferring the relative influences of gene flow and drift on the distribution of genetic variability. Evolution 53: 1898–1914. Johnson, J. A., J. E. Toepfer, and P. O. Dunn . 2003. Contrasting patterns of mitochondrial and microsatellite population structure in fragmented populations of greater prairie-chickens. Molecular Ecology 12: 3335–3347. Kimura, M. and G. H. Weiss . 1964. The stepping stone model of population structure and the decrease of genetic correlation with distance. Genetics 49: 561–576. Klinkicht, M. . 1993. Untersuchungen zum Paarungssystem des Alpenmurmeltiers, Marmota m. marmota mittels DNA fingerprinting. Dissertation. University of Munich, Munich, Germany. Koenig, W. D., D. Van Vuren, and P. N. Hooge . 1996. Detectability, philopatry, and the distribution of dispersal distances in vertebrates. Trends in Ecology and Evolution 11: 514–517. Kullman, L. . 2002. Rapid recent range-margin rise of tree and shrub species in the Swedish Scandes. Journal of Ecology 90: 68–77. Lawlor, T. E. . 1998. Biogeography of Great Basin mammals: paradigm lost? Journal of Mammalogy 79: 1111–1130. MacArthur, R. H. and E. O. Wilson . 1967. The theory of island biogeography. Princeton University Press, Princeton, New Jersey, USA. Mantel, N. . 1967. The detection of disease clustering and a generalized regression approach. Cancer Research 27: 209–220. May, B., T. A. Gavin, P. W. Sherman, and T. M. Korves . 1997. Characterization of microsatellite loci in the northern Idaho ground squirrel Spermophilus brunneus brunneus. Molecular Ecology 6: 399–400. McDonald, K. A. and J. H. Brown . 1992. Using montane mammals to model extinctions due to global change. Conservation Biology 6: 409–415. Miller, M. P. . 1997. Tools for population genetic analysis (TFPGA) 1.3: a Windows program for the analysis of allozyme and molecular population genetic data. 〈http://bioweb.usu.edu/mpmbio/〉. Munroe, J. S. . 2003. Estimates of Little Ice Age climate inferred through historical rephotography, northern Uinta Mountains, U.S.A. Arctic, Antarctic, and Alpine Research 35: 489–498. Nei, M. . 1972. Genetic distance between populations. American Naturalist 106: 283–292. Nei, M. . 1978. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89: 583–590. Orlóci, L. . 1994. Global warming: the process and its anticipated phytoclimatic effects in temperate and cold zones. Coenose 9: 69–74. Paetkau, D., G. F. Shields, and C. Strobeck . 1998. Gene flow between insular, coastal and interior populations of brown bears in Alaska. Molecular Ecology 7: 1283–1292. Paetkau, D., L. P. Waits, P. L. Clarkson, L. Craighead, and C. Strobeck . 1997. An empirical evaluation of genetic distance statistics using microsatellite data from bear (Ursidae) populations. Genetics 147: 1943–1957. Raymond, M. and F. Rousset . 1995. GENEPOP (Version 1.2): population genetics software for exact tests and ecumenicism. Journal of Heredity 86: 248–249. 〈http://wbiomed.curtin.edu.au/genepop/〉. Rice, W. R. . 1989. Analyzing tables of statistical tests. Evolution 43: 223–225. Schwartz, O. A., K. B. Armitage, and D. Van Vuren . 1998. A 32-year demography of yellow-bellied marmots Marmota flaviventris. Journal of Zoology, London 246: 337–346. Shafer, C. L. . 1990. Nature reserves: island theory and conservation practice. Smithsonian Institution Press, Washington, D.C., USA. Stevens, S., J. Coffin, and C. Strobeck . 1997. Microsatellite loci in Columbian ground squirrels Spermophilus columbianus. Molecular Ecology 6: 493–495. Taberlet, P., J-J. Camarra, S. Griffin, E. Uhres, O. Hanotte, L. P. Waits, C. Dubois-Paganon, T. Burke, and J. Bouvet . 1997. Noninvasive genetic tracking of the endangered Pyrenean brown bear population. Molecular Ecology 6: 869–876. Turgeon, J. and L. Bernatchez . 2001. Clinal variation at microsatellite loci reveals historical intergradation between glacial races of Coregonus artedi (Teleostei: Coregoninae). Evolution 55: 2274–2286. Van Vuren, D. and K. B. Armitage . 1994. Survival of dispersing and philopatric yellow-bellied marmots: what is the cost of dispersal? Oikos 69: 179–181. Vigilant, L. . 1999. An evaluation of techniques for the extraction and amplification of DNA from naturally shed hairs. Biological Chemistry 380: 1329–1331. Vincenty, T. . 1975. Direct and inverse solutions of the geodesics on the ellipsoid with applications of nested equations. Survey Review 22: 88–93. 〈http://www.auslig.gov.au/geodesy/datums/distance.htm〉. Vos, C. C., A. G. Antonisse-De Jong, P. W. Goedhart, and M. J M. Smulders . 2001. Genetic similarity as a measure for connectivity between fragmented populations of the moor frog (Rana arvalis). Heredity 86: 598–608. Wahlund, S. . 1928. Zusammensetzung von populationen und korreletionser cheinungen vom standpunkt der vererbungslehre aus betrachtet. Hereditas 11: 65–106. Waser, P. M. and C. Strobeck . 1998. Genetic signatures of interpopulation dispersal. Trends in Ecology and Evolution 13: 43–44. Weir, B. S. and C. C. Cockerham . 1984. Estimating F-statistics for the analysis of population structure. Evolution 38: 1358–1370. Wright, S. . 1943. Isolation by distance. Genetics 28: 114–138. Zhang, Y-G., D-Q. Li, L-Q. Rao, Q-M. Xiao, and D. Liu . 2003. Identification of polymorphic microsatellite DNA loci and paternity testing of Amur tigers. Acta Zoologica Sinica 49: 118–123. Citing Literature Volume86, Issue8August 2005Pages 2145-2153 ReferencesRelatedInformation
Referência(s)