Revisão Acesso aberto Revisado por pares

In the Beginning, Escherichia coli Assembled the Proto-ring: An Initial Phase of Division

2013; Elsevier BV; Volume: 288; Issue: 29 Linguagem: Inglês

10.1074/jbc.r113.479519

ISSN

1083-351X

Autores

Ana Isabel Rico, Marcin Krupka, Miguel Vicente,

Tópico(s)

Protein Structure and Dynamics

Resumo

Cell division in Escherichia coli begins by assembling three proteins, FtsZ, FtsA, and ZipA, to form a proto-ring at midcell. These proteins nucleate an assembly of at least 35 components, the divisome. The structuring of FtsZ to form a ring and the processes that effect constriction have been explained by alternative but not mutually exclusive mechanisms. We discuss how FtsA and ZipA provide anchoring of the cytoplasmic FtsZ to the membrane and how a temporal sequence of alternative protein interactions may operate in the maturation and stability of the proto-ring. How the force needed for constriction is generated and how the proto-ring proteins relate to peptidoglycan synthesis remain as the main challenges for future research. Cell division in Escherichia coli begins by assembling three proteins, FtsZ, FtsA, and ZipA, to form a proto-ring at midcell. These proteins nucleate an assembly of at least 35 components, the divisome. The structuring of FtsZ to form a ring and the processes that effect constriction have been explained by alternative but not mutually exclusive mechanisms. We discuss how FtsA and ZipA provide anchoring of the cytoplasmic FtsZ to the membrane and how a temporal sequence of alternative protein interactions may operate in the maturation and stability of the proto-ring. How the force needed for constriction is generated and how the proto-ring proteins relate to peptidoglycan synthesis remain as the main challenges for future research. Cell division is the last event in the bacterial cell cycle. It takes place by producing a rigid transversal septum after the growth processes fully duplicate the contents of the cell. Septation is always preceded by segregation of the duplicated nucleoids, ensuring that each of the daughter cells contains a fully replicated chromosome. Specialized molecules control the positioning of the division machinery at midcell, preventing any harmful fragmentation that septum progression could cause on unsegregated nucleoids. The division machinery, the divisome, establishes a complex interacting network together with DNA, lipids, and peptidoglycan components. It comprises a variable number of proteins, depending on the bacterial species. These proteins have redundant multiple functions and connections serving as safeguards to complete division and to guarantee the efficiency and versatility of the process. Altogether, an efficient division process allows the proliferation of bacteria under a variety of conditions, and it is one of the reasons for their success in the environment. Free-living bacteria, such as Escherichia coli, have more elaborated divisomes, whereas those that need to grow as intracellular parasites, as such Mycoplasma genitalium, have streamlined ones (1.Glass J.I. Assad-Garcia N. Alperovich N. Yooseph S. 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Microbiol. 2006; 61: 5-8Crossref PubMed Scopus (108) Google Scholar). In the proto-ring structure, the cytoplasmic GTPase FtsZ is anchored to the membrane by its interaction with ZipA and FtsA. ZipA is a bitopic protein containing a transmembrane domain (5.Hale C.A. de Boer P.A. Direct binding of FtsZ to ZipA, an essential component of the septal ring structure that mediates cell division in E. coli.Cell. 1997; 88: 175-185Abstract Full Text Full Text PDF PubMed Scopus (409) Google Scholar). FtsA is a protein of the actin family that associates with the membrane by a short amphipathic helix (6.Pichoff S. Lutkenhaus J. Tethering the Z ring to the membrane through a conserved membrane targeting sequence in FtsA.Mol. Microbiol. 2005; 55: 1722-1734Crossref PubMed Scopus (328) Google Scholar, 7.Jiménez M. Martos A. Vicente M. Rivas G. 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A maturation period takes place after the proto-ring is assembled and before the rest of the divisome proteins become incorporated (10.Aarsman M.E. Piette A. Fraipont C. Vinkenvleugel T.M. Nguyen-Distèche M. den Blaauwen T. Maturation of the Escherichia coli divisome occurs in two steps.Mol. Microbiol. 2005; 55: 1631-1645Crossref PubMed Scopus (247) Google Scholar). During maturation, the proto-ring assembly is not stable (11.Rico A.I. García-Ovalle M. Palacios P. Casanova M. Vicente M. Role of Escherichia coli FtsN protein in the assembly and stability of the cell division ring.Mol. Microbiol. 2010; 76: 760-771Crossref PubMed Scopus (44) Google Scholar). Once the full divisome is assembled, the motor force, likely exerted by the polymerization of FtsZ, results in membrane constriction, followed by the production of a septum. Two negative regulatory systems, nucleoid occlusion and the Min system, have been described to determine the position of the division site at midcell. Their combined action inhibits polymerization of FtsZ, blocking the assembly of the proto-ring at places other than the cell center. Nucleoid occlusion blocks septation across the nucleoid, therefore excluding a potentially harmful guillotine effect on the chromosome. In E. coli, it is accomplished by SlmA, a DNA-associated division inhibitor directly involved in preventing FtsZ polymerization in the vicinity of the nucleoid (12.Bernhardt T.G. de Boer P.A. SlmA, a nucleoid-associated, FtsZ binding protein required for blocking septal ring assembly over chromosomes in E. coli.Mol. Cell. 2005; 18: 555-564Abstract Full Text Full Text PDF PubMed Scopus (391) Google Scholar). A dimer of SlmA binds simultaneously to two molecules of FtsZ and to specific DNA sequences distributed all over the chromosome except at the Ter region. Prior to division, Ter localizes at midcell, coinciding with the site in which the FtsZ ring is assembled, and it is the last chromosomal region to segregate (13.Tonthat N.K. Arold S.T. Pickering B.F. Van Dyke M.W. Liang S. Lu Y. Beuria T.K. Margolin W. Schumacher M.A. Molecular mechanism by which the nucleoid occlusion factor, SlmA, keeps cytokinesis in check.EMBO J. 2011; 30: 154-164Crossref PubMed Scopus (123) Google Scholar, 14.Cho H. McManus H.R. Dove S.L. Bernhardt T.G. Nucleoid occlusion factor SlmA is a DNA-activated FtsZ polymerization antagonist.Proc. Natl. Acad. Sci. U.S.A. 2011; 108: 3773-3778Crossref PubMed Scopus (144) Google Scholar). The E. coli Min system comprises three proteins, MinC, MinD, and MinE. Together, they inhibit the polymerization of FtsZ at the poles and therefore prevent the production of nonviable anucleated minicells. Although with a low activity, MinC is sufficient to inhibit the assembly of FtsZ polymers (15.Shiomi D. Margolin W. The C-terminal domain of MinC inhibits assembly of the Z ring in Escherichia coli.J. Bacteriol. 2007; 189: 236-243Crossref PubMed Scopus (46) Google Scholar). It has been proposed that the C-terminal domain of MinC interacts directly with FtsZ filaments, preventing FtsZ-FtsZ lateral interactions and disrupting the interactions with FtsA and ZipA, which are essential for Z ring formation (15.Shiomi D. Margolin W. The C-terminal domain of MinC inhibits assembly of the Z ring in Escherichia coli.J. Bacteriol. 2007; 189: 236-243Crossref PubMed Scopus (46) Google Scholar, 16.Dajkovic A. Lan G. Sun S.X. Wirtz D. Lutkenhaus J. MinC spatially controls bacterial cytokinesis by antagonizing the scaffolding function of FtsZ.Curr. Biol. 2008; 18: 235-244Abstract Full Text Full Text PDF PubMed Scopus (161) Google Scholar, 17.Shen B. Lutkenhaus J. Examination of the interaction between FtsZ and MinCN in E. coli suggests how MinC disrupts Z rings.Mol. Microbiol. 2010; 75: 1285-1298Crossref PubMed Scopus (74) Google Scholar). MinD is an ATPase that activates and anchors MinC to the membrane. MinE regulates the localization of the MinCD complex by restricting it to the cell poles, thus allowing the FtsZ ring assembly only at midcell (for review, see Ref. 18.Bramkamp M. van Baarle S. Division site selection in rod-shaped bacteria.Curr. Opin. Microbiol. 2009; 12: 683-688Crossref PubMed Scopus (73) Google Scholar). However, even in the absence of MinE, FtsZ rings located at the poles are more sensitive to MinCD-induced disassembly than those present at non-polar positions (19.Shen B. Lutkenhaus J. Differences in MinC/MinD sensitivity between polar and internal Z rings in Escherichia coli.J. Bacteriol. 2011; 193: 367-376Crossref PubMed Scopus (7) Google Scholar). In addition, the functionality of the Min system may be further enhanced at the poles, probably because MinCD senses membrane curvature (20.Juarez J.R. Margolin W. 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FtsZ polymers need two more proto-ring components, the FtsA and ZipA proteins, both associated with the inner membrane, to localize in a ring in close proximity to it. Although nonessential for the division progress, the Zap (FtsZ-associated protein) proteins may be considered as accessory components of the proto-ring because they affect the assembly and dynamics of FtsZ. The best described and phylogenetically most conserved component of the proto-ring is the cytoplasmic GTPase FtsZ, a structural homolog of eukaryotic tubulin (23.Erickson H.P. FtsZ, a prokaryotic homologue of tubulin?.Cell. 1995; 80: 367-370Abstract Full Text PDF PubMed Scopus (264) Google Scholar, 24.Erickson H.P. FtsZ, a tubulin homologue in prokaryote cell division.Trends Cell Biol. 1997; 7: 362-367Abstract Full Text PDF PubMed Scopus (200) Google Scholar, 25.Löwe J. Amos L.A. Crystal structure of the bacterial cell-division protein FtsZ.Nature. 1998; 391: 203-206Crossref PubMed Scopus (723) Google Scholar). Highly dynamic protofilaments of FtsZ are reorganized in the vicinity of the cell membrane at the division site. Their continuous rearrangement during the cell division process is postulated to be the main force driving membrane constriction, a process that starts when the divisome is fully assembled (reviewed in Refs. 26.Erickson H.P. Anderson D.E. Osawa M. FtsZ in bacterial cytokinesis: cytoskeleton and force generator all in one.Microbiol. Mol. Biol. Rev. 2010; 74: 504-528Crossref PubMed Scopus (471) Google Scholar and 27.Mingorance J. Rivas G. Vélez M. Gómez-Puertas P. Vicente M. Strong FtsZ is with the force: mechanisms to constrict bacteria.Trends Microbiol. 2010; 18: 348-356Abstract Full Text Full Text PDF PubMed Scopus (108) Google Scholar). Available techniques still do not allow an exact visualization of the detailed arrangement of FtsZ polymers in the proto-ring. Two models, ribbon and scattered, have been proposed to describe the arrangement of FtsZ polymers in the ring. The ribbon model proposes that FtsZ would form sufficiently long filaments to coat the internal surface of the inner membrane and assemble side-by-side as a single band. A compact ring would then be maintained by lateral contacts between filaments. The proof to support this model is that in vitro conditions favoring the elongation of and the lateral associations between protofilaments lead to the assembly of FtsZ into filaments longer than 500 nm (28.Mingorance J. Tadros M. Vicente M. González J.M. Rivas G. Vélez M. Visualization of single Escherichia coli FtsZ filament dynamics with atomic force microscopy.J. Biol. Chem. 2005; 280: 20909-20914Abstract Full Text Full Text PDF PubMed Scopus (100) Google Scholar). Such filaments have been observed when FtsZ is adsorbed onto mica surfaces, when calcium is present, or at low pH (<6.0) (29.Mateos-Gil P. Márquez I. López-Navajas P. Jiménez M. Vicente M. Mingorance J. Rivas G. Vélez M. 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In B. subtilis, in which Zap proteins are not present, a positively charged variable region found downstream of this conserved sequence mediates electrostatic interactions between FtsZ protofilaments. The equivalent region of the E. coli FtsZ protein is not charged, requiring the Zap proteins to stabilize FtsZ lateral interactions (54.Buske P.J. Levin P.A. Extreme C terminus of bacterial cytoskeletal protein FtsZ plays fundamental role in assembly independent of modulatory proteins.J. Biol. Chem. 2012; 287: 10945-10957Abstract Full Text Full Text PDF PubMed Scopus (74) Google Scholar). FtsA is an ATP-binding protein and belongs to the actin/Hsp70 superfamily (55.van den Ent F. Löwe J. Crystal structure of the cell division protein FtsA from Thermotoga maritima.EMBO J. 2000; 19: 5300-5307Crossref PubMed Scopus (167) Google Scholar). The self-interaction of FtsA is essential for the E. coli division process (56.Yim L. Vandenbussche G. Mingorance J. Rueda S. Casanova M. Ruysschaert J.M. 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When attached to a lipid monolayer, FtsA protofilaments from Thermotoga maritima (60.Szwedziak P. Wang Q. Freund S.M. Löwe J. FtsA forms actin-like protofilaments.EMBO J. 2012; 31: 2249-2260Crossref PubMed Scopus (179) Google Scholar) and E. coli (61.Martos A. Monterroso B. Zorrilla S. Reija B. Alfonso C. Mingorance J. Rivas G. Jiménez M. Isolation, characterization and lipid-binding properties of the recalcitrant FtsA division protein from Escherichia coli.PLoS ONE. 2012; 7: e39829Crossref PubMed Scopus (25) Google Scholar) undergo a conformational change, forming straight tubular structures. A short C-terminal amphipathic helix in FtsA is responsible for its attachment to the membrane (6.Pichoff S. Lutkenhaus J. Tethering the Z ring to the membrane through a conserved membrane targeting sequence in FtsA.Mol. Microbiol. 2005; 55: 1722-1734Crossref PubMed Scopus (328) Google Scholar), and it also diminishes self-interaction (56.Yim L. Vandenbussche G. Mingorance J. Rueda S. Casanova M. Ruysschaert J.M. Vicente M. Role of the carboxy terminus of Escherichia coli FtsA in self-interaction and cell division.J. Bacteriol. 2000; 182: 6366-6373Crossref PubMed Scopus (49) Google Scholar). Gene constructs engineered in E. coli to produce FtsA-FtsA in tandem result in FtsZ polymers being retained at the cell poles after septation, suggesting that the dimerization or oligomerization of FtsA modifies the stability of FtsZ polymers and promotes Z ring integrity (62.Shiomi D. Margolin W. Dimerization or oligomerization of the actin-like FtsA protein enhances the integrity of the cytokinetic Z ring.Mol. Microbiol. 2007; 66: 1396-1415PubMed Google Scholar). FtsZ is proposed to be involved in FtsA dimerization given that FtsA crystallizes as a dimer when the FtsZ C-terminal peptide is bound to FtsA but as a monomer when the FtsZ peptide is absent (55.van den Ent F. Löwe J. Crystal structure of the cell division protein FtsA from Thermotoga maritima.EMBO J. 2000; 19: 5300-5307Crossref PubMed Scopus (167) Google Scholar, 60.Szwedziak P. Wang Q. Freund S.M. Löwe J. FtsA forms actin-like protofilaments.EMBO J. 2012; 31: 2249-2260Crossref PubMed Scopus (179) Google Scholar). These data suggest a cooperative interaction of three components, i.e. FtsZ, FtsA, and the cytoplasmic membrane, to assemble in a stable proto-ring composed of FtsZ and FtsA polymers arranged in the correct orientation at the inner membrane (Fig. 1a). FtsA is also a key connector between the proto-ring components and some downstream proteins, such as FtsN. The 1C subdomain of FtsA is necessary and sufficient to interact with the cytoplasmic domain of FtsN (57.Rico A.I. García-Ovalle M. Mingorance J. Vicente M. Role of two essential domains of Escherichia coli FtsA in localization and progression of the division ring.Mol. 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