First Report of Grapevine red blotch-associated virus in Archival Grapevine Material From Sonoma County, California
2015; American Phytopathological Society; Volume: 99; Issue: 6 Linguagem: Inglês
10.1094/pdis-12-14-1252-pdn
ISSN1943-7692
AutoresMaher Al Rwahnih, Adib Rowhani, Deborah Golino,
Tópico(s)Plant Disease Management Techniques
ResumoHomePlant DiseaseVol. 99, No. 6First Report of Grapevine red blotch-associated virus in Archival Grapevine Material From Sonoma County, California PreviousNext DISEASE NOTES OPENOpen Access licenseFirst Report of Grapevine red blotch-associated virus in Archival Grapevine Material From Sonoma County, CaliforniaM. Al Rwahnih, A. Rowhani, and D. GolinoM. Al Rwahnih, A. Rowhani, and D. GolinoAffiliationsAuthors and Affiliations M. Al Rwahnih A. Rowhani D. Golino , Department of Plant Pathology, University of California, Davis 95616. Published Online:14 May 2015https://doi.org/10.1094/PDIS-12-14-1252-PDNAboutSections ToolsAdd to favoritesDownload CitationsTrack Citations ShareShare onFacebookTwitterLinked InRedditEmailWechat In 2008, a disease characterized by red blotches along leaf margins and red veins under the leaf surfaces was recognized in red grape cultivars in Napa Valley, CA. Symptoms appeared to be associated with a DNA virus named Grapevine red blotch-associated virus (GRBaV) from the family Geminiviridae (Al Rwahnih et al. 2013). The original source and the vector/s of this virus are still uncertain. Further studies showed that GRBaV is widely distributed in the United States (Krenz et al. 2014). In order to assess the novelty of GRBaV, we analyzed historic specimens of California grapevines preserved at the Center for Plant Diversity/Herbarium, University of California, Davis. Tissues were available only from 56 grapevine specimens (23 Vitis vinifera and 33 American hybrids) in the collection from several counties including Napa and Sonoma and tested for GRBaV. Specimens were originally collected by Professor Harold Olmo (Department of Enology and Viticulture, University of California, Davis) between 1937 and 1950. To avoid possible cross contamination, samples were processed with all new reagents in two isolated laboratories in which research on grapevine had not been conducted previously, and separate from where the positive controls were carried out. Total nucleic acid (TNA) was extracted from approximately 0.5 g (mostly leaf/petiole) tissue using the RNeasy Mini Kit (Qiagen, Valencia, CA). PCR analysis was performed using the Repfor and Reprev primers set (Krenz et al. 2014). Of the 56 specimens tested, one gave a specific PCR product that shared 97 to 100% nucleotide homology with GRBaV sequences currently available in the GenBank database. This particular sample was V. vinifera cv. Early Burgundy (common syn. Abouriou), collected in Sonoma County in 1940. The leaves showed typical red blotch disease symptoms. To further this analysis, more tissue was collected from the original Early Burgundy specimen at the herbarium, re-extracted, and the TNA was divided into two aliquots. One was used to repeat the PCR and the second was used to perform NGS analysis. NGS library construction and deep sequencing were performed at the University of Southern California sequencing facility (where work with grapevine material had not been performed previously) using the Illumina NextSEquation 500 platform. The analysis generated about 88 million Illumina reads (75 nt in length) of which more than 92,000 could be mapped to the GRBaV genome. The full genome sequence of this herbarium isolate (Accession No. KP221559) shared 92 to 99% identity with other GRBaV isolates for which sequence information is available in the GenBank including 99% with NY147 (KF751708), which is classified in clade 2. Results of our study suggest that GRBaV is not a newly emergent virus, but appears to have been present in California vineyards 74 years ago.References:Al Rwahnih, M., et al. 2013. Phytopathology 103:1069. https://doi.org/10.1094/PHYTO-10-12-0253-R Link, ISI, Google ScholarKrenz, B., et al. 2014. Phytopathology 104:1232. https://doi.org/10.1094/PHYTO-02-14-0053-R Link, ISI, Google ScholarDetailsFiguresLiterature CitedRelated Vol. 99, No. 6 June 2015SubscribeISSN:0191-2917e-ISSN:1943-7692 Metrics Article History Issue Date: 23 Jun 2015Published: 14 May 2015First Look: 27 Jan 2015Accepted: 20 Dec 2014 Pages: 895-895 Information© 2015 The American Phytopathological SocietyCited byGrapevine red blotch virus C2 and V2 are suppressors of post-transcriptional gene silencingHeliyon, Vol. 102Molecular characterization of divergent isolates of grapevine red blotch virus from Blanc du Soleil, an interspecific hybrid white grapevine cultivarAshrafou Ouro-Djobo, Kristian Stevens, Justin J. Scheiner, Violeta M. Tsolova, Frances M. Pontasch, Sheila A. McBride, David N. 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