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The International HapMap Project Web site: Figure 1.

2005; Cold Spring Harbor Laboratory Press; Volume: 15; Issue: 11 Linguagem: Inglês

10.1101/gr.4413105

1549-5469

Guðmundur Á. Þórisson, Albert V. Smith, Lalitha Krishnan, Lincoln Stein,

Gene expression and cancer classification

The HapMap Web site at http://www.hapmap.org is the primary portal to genotype data produced as part of the International Haplotype Map Project. In phase I of the project, >1.1 million SNPs were genotyped in 270 individuals from four worldwide populations. The HapMap Web site provides researchers with a number of tools that allow them to analyze the data as well as download data for local analyses. This paper presents step-by-step guides to using those tools, including guides for retrieving genotype and frequency data, picking tag-SNPs for use in association studies, viewing haplotypes graphically, and examining marker-to-marker LD patterns.