NNDB: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure
2009; Oxford University Press; Volume: 38; Issue: suppl_1 Linguagem: Inglês
10.1093/nar/gkp892
ISSN1362-4962
AutoresDouglas H. Turner, David H. Mathews,
Tópico(s)Bacterial Genetics and Biotechnology
ResumoThe Nearest Neighbor Database (NNDB, http://rna.urmc.rochester.edu/NNDB) is a web-based resource for disseminating parameter sets for predicting nucleic acid secondary structure stabilities. For each set of parameters, the database includes the set of rules with descriptive text, sequence-dependent parameters in plain text and html, literature references to experiments and usage tutorials. The initial release covers parameters for predicting RNA folding free energy and enthalpy changes.
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