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BIBTEX RIS

MISA-web: a web server for microsatellite prediction

2017; Oxford University Press; Volume: 33; Issue: 16 Linguagem: Inglês

10.1093/bioinformatics/btx198

ISSN

1367-4811

Autores

Sebastian Beier, Thomas Thiel, Thomas A. Münch, Uwe Scholz, Martin Mascher,

Tópico(s)

Genomics and Phylogenetic Studies

Resumo

Microsatellites are a widely-used marker system in plant genetics and forensics. The development of reliable microsatellite markers from resequencing data is challenging.We extended MISA, a computational tool assisting the development of microsatellite markers, and reimplemented it as a web-based application. We improved compound microsatellite detection and added the possibility to display and export MISA results in GFF3 format for downstream analysis.MISA-web can be accessed under http://misaweb.ipk-gatersleben.de/. The website provides tutorials, usage note as well as download links to the source code.scholz@ipk-gatersleben.de.

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