Pré-print Acesso aberto

IQ-TREE 2: New models and efficient methods for phylogenetic inference in the genomic era

2019; Cold Spring Harbor Laboratory; Linguagem: Inglês

10.1101/849372

Autores

Bùi Quang Minh, Heiko A. Schmidt, Olga Chernomor, Dominik Schrempf, Michael D. Woodhams, Arndt von Haeseler, Robert Lanfear,

Tópico(s)

Genetic diversity and population structure

Resumo

Abstract IQ-TREE ( http://www.iqtree.org ) is a user-friendly and widely used software package for phylogenetic inference using maximum likelihood. Since the release of version 1 in 2014, we have continuously expanded IQ-TREE to integrate a plethora of new models of sequence evolution and efficient computational approaches of phylogenetic inference to deal with genomic data. Here, we describe notable features of IQ-TREE version 2 and highlight the key advantages over other software.

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